AmelieSchreiber/codex_swebenchpro_traces-bucket
219 MB
Amelie Schreiber
AmelieSchreiber
AI & ML interests
Diffusion and flow matching models for proteins, small molecules, DNA, and RNA, protein language models, machine translation, equivariant attention mechanisms, LoRA, and QLoRA.
Recent Activity
updated a dataset 16 days ago
AmelieSchreiber/toricblm-dataset-state-toricblm-structure-priority-balanced-3day-20260709t185034z-epoch-002 published a dataset 16 days ago
AmelieSchreiber/toricblm-dataset-state-toricblm-structure-priority-balanced-3day-20260709t185034z-epoch-002 updated a dataset 16 days ago
AmelieSchreiber/toricblm-dataset-state-toricblm-structure-priority-balanced-3day-20260709t185034z-epoch-001Organizations
Posts 5
Post
2227
Latest OpenAI Parameter Golf Competition Training Run BPB (<1K steps on a single 4090) See: ToricBLM, ToricGT, and TropicalGT methods
Articles 21
Article
ToricBLM: Thought Alcoves, Tropical Attention, and Small Models With Serious Geometry
ESMBind (or ESMB) are LoRA finetuned ESM-2 models for predicting general binding sites and active sites of proteins based on sequence alone.
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AmelieSchreiber/esm2_t12_35M_lora_binding_sites_770K_v1
Updated • 13 -
AmelieSchreiber/esm2_t12_35M_lora_binding_sites_v2_cp3
Token Classification • Updated • 28 • 7 -
AmelieSchreiber/esm2_t12_35M_lora_binding_sites_v2_cp2
Token Classification • Updated • 1 -
AmelieSchreiber/esm2_t12_35M_lora_binding_sites_v2_cp1
Token Classification • Updated • 5
A retraining of a TokenGT, embedding space GFlowNets GoT reasoning 4x4M-Soft-MoE model with tropical ring attention and geometric algebra constraints
ESMBind (or ESMB) are LoRA finetuned ESM-2 models for predicting general binding sites and active sites of proteins based on sequence alone.
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AmelieSchreiber/esm2_t12_35M_lora_binding_sites_770K_v1
Updated • 13 -
AmelieSchreiber/esm2_t12_35M_lora_binding_sites_v2_cp3
Token Classification • Updated • 28 • 7 -
AmelieSchreiber/esm2_t12_35M_lora_binding_sites_v2_cp2
Token Classification • Updated • 1 -
AmelieSchreiber/esm2_t12_35M_lora_binding_sites_v2_cp1
Token Classification • Updated • 5
models 60
AmelieSchreiber/ToricGT_160M_FoT
Text Generation • Updated
AmelieSchreiber/toricgt-checkpoints
Updated
AmelieSchreiber/UBio-E2Former-LSR
Updated
AmelieSchreiber/LucaOne
Updated • 8
AmelieSchreiber/RoseTTAFold2-PPI
Updated
AmelieSchreiber/AlphaChip
Updated • 2
AmelieSchreiber/IgDiff
Updated
AmelieSchreiber/DiG
Updated
AmelieSchreiber/Graphormer
Updated
AmelieSchreiber/esm_mlmppi_ph50_40K
Updated
datasets 29
AmelieSchreiber/toricblm-dataset-state-toricblm-structure-priority-balanced-3day-20260709t185034z-epoch-002
Viewer • Updated • 1 • 61
AmelieSchreiber/toricblm-dataset-state-toricblm-structure-priority-balanced-3day-20260709t185034z-epoch-001
Viewer • Updated • 1 • 57
AmelieSchreiber/toricblm_fot
Viewer • Updated • 10.7k • 559
AmelieSchreiber/uniprot_fot
Viewer • Updated • 1 • 96
AmelieSchreiber/codex5.5_ToT
Viewer • Updated • 3.89k • 29
AmelieSchreiber/toricgt-curated-splits
Viewer • Updated • 5.79M • 89
AmelieSchreiber/DynamicPDB
Updated • 9
AmelieSchreiber/ATLAS
Updated • 8
AmelieSchreiber/iska-net-2_base
Updated • 8
AmelieSchreiber/ReactZyme
Viewer • Updated • 258k • 25