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18 following AI & ML interests Diffusion and flow matching models for proteins, small molecules, DNA, and RNA, protein language models, machine translation, equivariant attention mechanisms, LoRA, and QLoRA.
Recent Activity Organizations AmelieSchreiber 's activity All Models Datasets Spaces Buckets Papers Collections Community Posts Upvotes Likes Articles view article Tropical Quivers for Modern AI: A Guided Tour of a Research Program view article Surface Orders, Cyclic Time, and a Concrete Hilbert–Pólya Framework view article ThermoGFN-IF for Catalysis: A Protein Sequence Design Model Tuned with GFlowNets for Stable Protein Design and Kinetic-Aware Enzyme Engineering published an article over 1 year ago published an article over 1 year ago view article A Guide to Designing New Functional Proteins and Improving Protein Function, Stability, and Diversity with Generative AI published an article almost 2 years ago published an article over 2 years ago view article Predicting the Effects of Mutations on Protein Function with ESM-2 published an article over 2 years ago view article Faster Persistent Homology Alignment and Protein Complex Clustering with ESM-2 and Persistence Landscapes published an article over 2 years ago view article Clustering Protein Complexes using Persistent Homology and Finetuning ESM-2 for PPI Network Prediction published an article over 2 years ago view article ESM-2 for Generating and Optimizing Peptide Binders for Target Proteins published an article over 2 years ago view article Persistent Homology Alignment (PHA): Replacing Multiple Sequence Alignments using ESM-2 and Persistent Homology published an article over 2 years ago view article In Silico Directed Evolution of Protein Sequences with ESM-2 and EvoProtGrad published an article over 2 years ago view article QLoRA for ESM-2 and Post Translational Modification Site Prediction published an article over 2 years ago view article Estimating the Intrinsic Dimension of Protein Sequence Embeddings using ESM-2 published an article over 2 years ago view article Predicting Protein-Protein Interactions Using a Protein Language Model and Linear Sum Assignment published an article over 2 years ago published an article over 2 years ago view article ESMBind (ESMB): Low Rank Adaptation of ESM-2 for Protein Binding Site Prediction